STRINGSTRING
AEG01346.1 AEG01346.1 AEG01795.1 AEG01795.1 AEG00916.1 AEG00916.1 AEF99879.1 AEF99879.1 AEF99550.1 AEF99550.1 AEF99579.1 AEF99579.1 AEG00792.1 AEG00792.1 AEG02378.1 AEG02378.1 AEG00502.1 AEG00502.1 prfB prfB AEG01343.1 AEG01343.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEG01346.1SMART: Diguanylate cyclase, predicted; TIGRFAM: Diguanylate cyclase, predicted; KEGG: pfo:Pfl01_4084 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted. (294 aa)    
Predicted Functional Partners:
AEG01795.1
KEGG: cvi:CV_1189 two-component system; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region.
 
    0.833
AEG00916.1
KEGG: mfa:Mfla_1761 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal.
 
 
    0.832
AEF99879.1
KEGG: cvi:CV_1189 two-component system; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region.
 
    0.793
AEF99550.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: nhl:Nhal_1407 diguanylate cyclase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-bin [...]
 
  
0.757
AEF99579.1
Diguanylate phosphodiesterase; KEGG: hch:HCH_04128 signal transduction protein; PFAM: Diguanylate phosphodiesterase, predicted; EAL C-terminal; SMART: Diguanylate phosphodiesterase, predicted.
 
    0.748
AEG00792.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Type IV pilus assembly PilZ; KEGG: hch:HCH_01032 signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
    0.746
AEG02378.1
KEGG: tcx:Tcr_2179 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region.
 
    0.674
AEG00502.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: dat:HRM2_43250 sensory box histidine kinase/response regulator; SMART: Diguanylate phosphodiesterase, predicted; Diguanylat [...]
 
 
0.671
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.666
AEG01343.1
TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: mep:MPQ_1677 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase.
  
    0.556
Your Current Organism:
Methylomonas methanica
NCBI taxonomy Id: 857087
Other names: M. methanica MC09, Methylomonas methanica MC09, Methylomonas methanica str. MC09, Methylomonas methanica strain MC09
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