STRINGSTRING
Sros_7646 Sros_7646 Sros_7647 Sros_7647 Sros_0187 Sros_0187 Sros_7645 Sros_7645 Sros_8313 Sros_8313 Sros_9103 Sros_9103 Sros_0068 Sros_0068 Sros_4098 Sros_4098 Sros_2643 Sros_2643
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_7646KEGG: pfo:Pfl01_4473 NAD-dependent epimerase/dehydratase. (208 aa)    
Predicted Functional Partners:
Sros_7647
KEGG: geo:Geob_0974 transcriptional regulator, HxlR family.
 
  
 0.673
Sros_0187
KEGG: bar:GBAA2051 hypothetical protein.
   
    0.517
Sros_7645
Oxidoreductase; KEGG: mlo:mlr3236 oxidoreductase.
  
    0.510
Sros_8313
KEGG: scl:sce8127 putative acetolactate synthase; Belongs to the TPP enzyme family.
  
    0.442
Sros_9103
KEGG: msl:Msil_2816 thiamine pyrophosphate protein domain protein TPP-binding; Belongs to the TPP enzyme family.
  
    0.421
Sros_0068
KEGG: bja:bsr4717 hypothetical protein.
   
    0.420
Sros_4098
KEGG: afw:Anae109_0547 hypothetical protein.
   
    0.420
Sros_2643
KEGG: aba:Acid345_0055 hypothetical protein.
   
    0.410
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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