STRINGSTRING
Slin_0807 Slin_0807 Slin_5949 Slin_5949 Slin_0806 Slin_0806 Slin_1650 Slin_1650 Slin_5163 Slin_5163 Slin_1629 Slin_1629 Slin_2677 Slin_2677 Slin_3219 Slin_3219 Slin_1902 Slin_1902 Slin_5203 Slin_5203 Slin_2797 Slin_2797
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_0807PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pfo:Pfl01_5133 PpiC-type peptidyl-prolyl cis- trans isomerase. (797 aa)    
Predicted Functional Partners:
Slin_5949
KEGG: sfu:Sfum_4007 hypothetical protein.
  
   
 0.746
Slin_0806
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: gur:Gura_2908 PpiC-type peptidyl-prolyl cis- trans isomerase.
 
    
0.684
Slin_1650
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein.
  
 
 
 0.658
Slin_5163
Two component regulator propeller domain protein; KEGG: mxa:MXAN_6150 sensor histidine kinase.
  
     0.650
Slin_1629
Hypothetical protein.
 
    0.648
Slin_2677
KEGG: pol:Bpro_2327 hypothetical protein.
  
     0.637
Slin_3219
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; KEGG: hypothetical protein.
  
     0.629
Slin_1902
Hypothetical protein; KEGG: bps:BPSS1434 membrane-anchored cell surface protein.
  
     0.625
Slin_5203
PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller; KEGG: hypothetical protein; K03640 peptidoglycan- associated lipoprotein.
 
 
 0.605
Slin_2797
KEGG: sfu:Sfum_4007 hypothetical protein.
  
   
 0.577
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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