STRINGSTRING
EGZ44673.1 EGZ44673.1 EGZ44672.1 EGZ44672.1 gpsA gpsA dnaG dnaG cmk cmk EGZ47988.1 EGZ47988.1 EGZ42687.1 EGZ42687.1 EGZ47172.1 EGZ47172.1 EGZ44061.1 EGZ44061.1 EGZ48173.1 EGZ48173.1 EGZ48963.1 EGZ48963.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EGZ44673.1PFAM: GTP-binding protein, HSR1-related; KEGG: pfo:Pfl01_5363 GTP-binding protein, HSR1-like. (460 aa)    
Predicted Functional Partners:
EGZ44672.1
KEGG: tgr:Tgr7_0150 hypothetical protein.
 
     0.958
gpsA
KEGG: tgr:Tgr7_3281 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase, NAD-dependent; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.875
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.874
cmk
PFAM: Cytidylate kinase domain; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: aha:AHA_1808 cytidylate kinase.
  
  
 0.727
EGZ47988.1
KEGG: tgr:Tgr7_3148 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal.
  
  
 0.710
EGZ42687.1
TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: tgr:Tgr7_2010 ribosomal large subunit pseudouridine synthase B; SMART: RNA-binding S4; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.685
EGZ47172.1
Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
  
 0.617
EGZ44061.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.601
EGZ48173.1
KEGG: tgr:Tgr7_0715 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02444; PFAM: Conserved hypothetical protein CHP02444.
   
    0.585
EGZ48963.1
PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; KEGG: tgr:Tgr7_1035 inosine-5'-monophosphate dehydrogenase; SMART: Cystathionine beta-synthase, core.
  
  
 0.569
Your Current Organism:
Thiorhodospira sibirica
NCBI taxonomy Id: 765914
Other names: T. sibirica ATCC 700588, Thiorhodospira sibirica A12, Thiorhodospira sibirica ATCC 700588, Thiorhodospira sibirica str. ATCC 700588, Thiorhodospira sibirica strain ATCC 700588
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