STRINGSTRING
Aaci_1243 Aaci_1243 Aaci_1244 Aaci_1244 Aaci_1245 Aaci_1245 Aaci_0645 Aaci_0645 Aaci_1246 Aaci_1246 Aaci_1857 Aaci_1857 Aaci_0643 Aaci_0643 Aaci_1242 Aaci_1242 Aaci_0043 Aaci_0043 Aaci_0652 Aaci_0652 Aaci_1247 Aaci_1247
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
Aaci_1243Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pfo:Pfl01_5633 GntR family transcriptional regulator. (137 aa)    
Predicted Functional Partners:
Aaci_1244
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hhe:HH0776 ABC transporter.
 
  
 0.927
Aaci_1245
Hypothetical protein.
       0.773
Aaci_0645
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt3186 putative ABC transporter, ATP- binding protein.
 
  
 0.732
Aaci_1246
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: sfu:Sfum_0406 rhodanese domain protein.
  
    0.519
Aaci_1857
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ppd:Ppro_1196 GntR family transcriptional regulator.
 
  
 0.498
Aaci_0643
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_5584 ABC transporter, ATP-binding protein.
  
  
 0.470
Aaci_1242
Hypothetical protein.
       0.453
Aaci_0043
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.418
Aaci_0652
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sml:Smlt0364 putative ATP binding component of ABC transporter.
  
  
 0.418
Aaci_1247
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: TRXm; thioredoxin m; Belongs to the thioredoxin family.
       0.418
Your Current Organism:
Alicyclobacillus acidocaldarius DSM 446
NCBI taxonomy Id: 521098
Other names: A. acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius ATCC 27009, Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius IFO 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius JCM 5260, Alicyclobacillus acidocaldarius subsp. acidocaldarius NBRC 15652, Alicyclobacillus acidocaldarius subsp. acidocaldarius NCIB 11725, Alicyclobacillus acidocaldarius subsp. acidocaldarius str. DSM 446, Alicyclobacillus acidocaldarius subsp. acidocaldarius strain DSM 446
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