STRINGSTRING
Caka_1803 Caka_1803 Caka_1804 Caka_1804 Caka_1844 Caka_1844 Caka_2635 Caka_2635 Caka_2632 Caka_2632
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caka_1803PFAM: amino acid-binding ACT domain protein; KEGG: ppg:PputGB1_0385 amino acid-binding ACT domain-containing protein. (170 aa)    
Predicted Functional Partners:
Caka_1804
KEGG: dba:Dbac_2887 protein of unknown function methylase putative.
       0.540
Caka_1844
Glycine dehydrogenase (decarboxylating); KEGG: car:cauri_1713 glycine cleavage system P protein; PFAM: Glycine cleavage system P-protein-like.
  
  
 0.505
Caka_2635
KEGG: vfm:VFMJ11_1011 hypothetical protein.
  
     0.476
Caka_2632
PFAM: protein of unknown function DUF214; KEGG: pag:PLES_09121 putative permease.
  
     0.440
Your Current Organism:
Coraliomargarita akajimensis
NCBI taxonomy Id: 583355
Other names: C. akajimensis DSM 45221, Coraliomargarita akajimensis DSM 45221, Coraliomargarita akajimensis str. DSM 45221, Coraliomargarita akajimensis strain DSM 45221
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