STRINGSTRING
Hoch_5939 Hoch_5939 Hoch_5934 Hoch_5934 Hoch_5938 Hoch_5938 Hoch_5937 Hoch_5937 Hoch_5936 Hoch_5936 Hoch_5935 Hoch_5935 Hoch_4323 Hoch_4323 Hoch_3144 Hoch_3144 Hoch_3143 Hoch_3143 Hoch_4322 Hoch_4322 Hoch_5155 Hoch_5155
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
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Experiments
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[Homology]
Score
Hoch_5939PFAM: extracellular solute-binding protein family 1; KEGG: ppg:PputGB1_1898 extracellular solute-binding protein. (610 aa)    
Predicted Functional Partners:
Hoch_5934
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3393 binding-protein-dependent transport systems inner membrane component.
 
 0.996
Hoch_5938
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet2585 Put. ABC transport protein, inner membrane component.
 
 0.992
Hoch_5937
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB3057 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.991
Hoch_5936
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpi:Rpic_3328 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.990
Hoch_5935
PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: ppw:PputW619_1737 small integral membrane protein-like protein.
 
    0.896
Hoch_4323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psa:PST_2192 mannitol ABC transporter, permease protein.
  
 
 0.703
Hoch_3144
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20327 trehalosemaltose transporter permease protein.
  
 
 0.694
Hoch_3143
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bcj:BCAL2804 putative sugar ABC transporter ATP-binding protein.
  
 
 0.618
Hoch_4322
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: avn:Avin_27370 ATP-binding protein of mannitol ABC transporter.
  
 
 0.618
Hoch_5155
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: psa:PST_3478 maltose/maltodextrin transporter ATP-binding protein.
  
 
 0.618
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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