STRINGSTRING
Amir_6339 Amir_6339 Amir_6346 Amir_6346 Amir_6280 Amir_6280 Amir_6342 Amir_6342 Amir_6347 Amir_6347 Amir_0134 Amir_0134 Amir_3553 Amir_3553 Amir_6654 Amir_6654 Amir_1732 Amir_1732 Amir_1730 Amir_1730 Amir_6341 Amir_6341
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Amir_6339PFAM: glycosyl transferase family 2; KEGG: ppg:PputGB1_2720 glycosyl transferase family protein. (285 aa)    
Predicted Functional Partners:
Amir_6346
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.805
Amir_6280
KEGG: ecw:EcE24377A_2329 dTDP-4-dehydrorhamnose 3,5- epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related.
 
  
 0.756
Amir_6342
PFAM: glycosyl transferase family 2; KEGG: pzu:PHZ_c3342 glycosyl transferase.
 
     0.742
Amir_6347
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dvm:DvMF_0141 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.712
Amir_0134
PFAM: ABC-2 type transporter; KEGG: tbd:Tbd_1878 ABC transporter permease protein.
 
  
 0.687
Amir_3553
PFAM: glycosyl transferase family 2; KEGG: rru:Rru_A2348 glycosyl transferase.
  
     0.680
Amir_6654
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.678
Amir_1732
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.667
Amir_1730
KEGG: ank:AnaeK_2858 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.653
Amir_6341
PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_1409 glycosyl transferase group 1.
  
    0.615
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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