STRINGSTRING
Sros_4034 Sros_4034 Sros_1231 Sros_1231 Sros_3222 Sros_3222 Sros_4035 Sros_4035 Sros_4036 Sros_4036 Sros_4037 Sros_4037
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_4034KEGG: ppg:PputGB1_4652 protein of unknown function zinc metallopeptidase putative. (266 aa)    
Predicted Functional Partners:
Sros_1231
KEGG: esa:ESA_00774 hypothetical protein.
  
     0.775
Sros_3222
KEGG: asu:Asuc_2016 protein of unknown function zinc metallopeptidase putative.
  
     0.680
Sros_4035
KEGG: ara:Arad_8530 sugar ABC transporter.
       0.491
Sros_4036
KEGG: acr:Acry_2317 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.491
Sros_4037
KEGG: acr:Acry_2316 ABC transporter related.
       0.491
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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