Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADR32677.1 | ADR34793.1 | Sulku_0009 | Sulku_2133 | Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR006675: IPR002646: IPR006674; KEGG: ant:Arnit_0649 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: Polynucleotide adenylyltransferase region; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | LmbE family protein; InterPro IPR003737; KEGG: ppg:PputGB1_4990 LmbE family protein; PFAM: LmbE family protein; SPTR: N-acetylglucosaminylphosphatidylinositol deacetylase family protein; PFAM: GlcNAc-PI de-N-acetylase. | 0.444 |
ADR34793.1 | ADR32677.1 | Sulku_2133 | Sulku_0009 | LmbE family protein; InterPro IPR003737; KEGG: ppg:PputGB1_4990 LmbE family protein; PFAM: LmbE family protein; SPTR: N-acetylglucosaminylphosphatidylinositol deacetylase family protein; PFAM: GlcNAc-PI de-N-acetylase. | Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR006675: IPR002646: IPR006674; KEGG: ant:Arnit_0649 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: Polynucleotide adenylyltransferase region; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.444 |
ADR34793.1 | ADR34794.1 | Sulku_2133 | Sulku_2134 | LmbE family protein; InterPro IPR003737; KEGG: ppg:PputGB1_4990 LmbE family protein; PFAM: LmbE family protein; SPTR: N-acetylglucosaminylphosphatidylinositol deacetylase family protein; PFAM: GlcNAc-PI de-N-acetylase. | Domain of unknown function DUF1919; COGs: COG3955 Exopolysaccharide biosynthesis protein; InterPro IPR015037; KEGG: pin:Ping_0325 exopolysaccharide biosynthesis protein-like protein; PFAM: Domain of unknown function DUF1919; SPTR: Exopolysaccharide biosynthesis protein-like protein; PFAM: Domain of unknown function (DUF1919). | 0.541 |
ADR34794.1 | ADR34793.1 | Sulku_2134 | Sulku_2133 | Domain of unknown function DUF1919; COGs: COG3955 Exopolysaccharide biosynthesis protein; InterPro IPR015037; KEGG: pin:Ping_0325 exopolysaccharide biosynthesis protein-like protein; PFAM: Domain of unknown function DUF1919; SPTR: Exopolysaccharide biosynthesis protein-like protein; PFAM: Domain of unknown function (DUF1919). | LmbE family protein; InterPro IPR003737; KEGG: ppg:PputGB1_4990 LmbE family protein; PFAM: LmbE family protein; SPTR: N-acetylglucosaminylphosphatidylinositol deacetylase family protein; PFAM: GlcNAc-PI de-N-acetylase. | 0.541 |