STRINGSTRING
Tint_2083 Tint_2083 Tint_2082 Tint_2082 Tint_2081 Tint_2081 Tint_2084 Tint_2084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_2083PFAM: protein of unknown function DUF81; KEGG: ppg:PputGB1_5196 hypothetical protein. (268 aa)    
Predicted Functional Partners:
Tint_2082
KEGG: pmy:Pmen_1836 hypothetical protein.
       0.533
Tint_2081
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: azo:azo0531 hypothetical protein.
       0.530
Tint_2084
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hna:Hneap_0596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.486
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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