STRINGSTRING
AFY17220.1 AFY17220.1 htrB htrB tag1 tag1 glyS glyS glyQ glyQ gmhB gmhB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AFY17220.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
htrB
[M] COG1560 Lauroyl/myristoyl acyltransferase.
  
  
 0.683
tag1
[L] COG2818 3-methyladenine DNA glycosylase.
     
 0.580
glyS
[J] COG0751 Glycyl-tRNA synthetase, beta subunit.
       0.451
glyQ
[J] COG0752 Glycyl-tRNA synthetase, alpha subunit.
       0.451
gmhB
D,D-heptose 1,7-bisphosphate phosphatase; [E] COG0241 Histidinol phosphatase and related phosphatases.
       0.449
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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