Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroE1 | hemF | PputUW4_00022 | PputUW4_00021 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.851 |
| aroE1 | pvdD | PputUW4_00022 | PputUW4_01549 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.581 |
| aroE1 | qor1 | PputUW4_00022 | PputUW4_00020 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.529 |
| hemF | aroE1 | PputUW4_00021 | PputUW4_00022 | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.851 |
| hemF | qor1 | PputUW4_00021 | PputUW4_00020 | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.547 |
| pvdD | aroE1 | PputUW4_01549 | PputUW4_00022 | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.581 |
| pvdD | qor1 | PputUW4_01549 | PputUW4_00020 | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | 0.538 |
| qor1 | aroE1 | PputUW4_00020 | PputUW4_00022 | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.529 |
| qor1 | hemF | PputUW4_00020 | PputUW4_00021 | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.547 |
| qor1 | pvdD | PputUW4_00020 | PputUW4_01549 | [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.538 |