STRINGSTRING
AFY17233.1 AFY17233.1 AFY22233.1 AFY22233.1 opuAB opuAB opuAA opuAA AFY22234.1 AFY22234.1 betC betC AFY21002.1 AFY21002.1 AFY21423.1 AFY21423.1 AFY17235.1 AFY17235.1 AFY17232.1 AFY17232.1 AFY22208.1 AFY22208.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17233.1Choline ABC transporter periplasmic binding protein; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components. (306 aa)    
Predicted Functional Partners:
AFY22233.1
[E] COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.993
opuAB
[E] COG4176 ABC-type proline/glycine betaine transport system, permease component.
 
 0.991
opuAA
[E] COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.985
AFY22234.1
Glycine betaine/L-proline transport ATP-binding subunit; [E] COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
 0.984
betC
Choline-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
 
     0.792
AFY21002.1
Glycine/betaine-binding protein precursor; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 
0.692
AFY21423.1
[E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
  
  
  0.536
AFY17235.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.534
AFY17232.1
[P] COG0659 Sulfate permease and related transporters (MFS superfamily).
       0.492
AFY22208.1
Oxidoreductase FAD-binding domain protein; [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
  
 0.474
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.