STRINGSTRING
betC betC AFY17233.1 AFY17233.1 AFY22345.1 AFY22345.1 AFY17235.1 AFY17235.1 AFY19347.1 AFY19347.1 AFY18940.1 AFY18940.1 betA1 betA1 AFY19412.1 AFY19412.1 AFY19498.1 AFY19498.1 AFY20189.1 AFY20189.1 betA2 betA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
betCCholine-sulfatase; [P] COG3119 Arylsulfatase A and related enzymes. (504 aa)    
Predicted Functional Partners:
AFY17233.1
Choline ABC transporter periplasmic binding protein; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
     0.792
AFY22345.1
Hypothetical protein.
 
     0.674
AFY17235.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.636
AFY19347.1
Glyoxalase/bleomycin resistance protein/dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
 
    0.604
AFY18940.1
[E] COG2303 Choline dehydrogenase and related flavoproteins.
    
 0.561
betA1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.561
AFY19412.1
[E] COG2303 Choline dehydrogenase and related flavoproteins.
    
 0.561
AFY19498.1
[E] COG2303 Choline dehydrogenase and related flavoproteins.
    
 0.561
AFY20189.1
[E] COG2303 Choline dehydrogenase and related flavoproteins.
    
 0.561
betA2
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
    
 0.561
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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