STRINGSTRING
AFY17247.1 AFY17247.1 AFY17246.1 AFY17246.1 AFY17245.1 AFY17245.1 AFY17244.1 AFY17244.1 AFY17243.1 AFY17243.1 pqqL pqqL AFY20242.1 AFY20242.1 flgC flgC AFY22365.1 AFY22365.1 ribD ribD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AFY17247.1Lipoprotein; [R] COG3218 ABC-type uncharacterized transport system, auxiliary component. (208 aa)    
Predicted Functional Partners:
AFY17246.1
[Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
   0.968
AFY17245.1
ABC transporter family protein; [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
    0.958
AFY17244.1
ABC transporter permease; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
  
 0.949
AFY17243.1
Hypothetical protein.
       0.662
pqqL
[R] COG0612 Predicted Zn-dependent peptidases.
 
     0.518
AFY20242.1
Glycosyl transferase family protein; [M] COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
     0.501
flgC
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.483
AFY22365.1
Hypothetical protein; [S] COG5528 Predicted integral membrane protein.
  
     0.479
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.424
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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