Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY17251.1 | AFY18281.1 | PputUW4_00042 | PputUW4_01074 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Hypothetical protein. | 0.679 |
| AFY17251.1 | AFY20063.1 | PputUW4_00042 | PputUW4_02868 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | [S] COG3139 Uncharacterized protein conserved in bacteria. | 0.747 |
| AFY17251.1 | AFY20065.1 | PputUW4_00042 | PputUW4_02870 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Metallophosphoesterase; [T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. | 0.659 |
| AFY17251.1 | AFY20686.1 | PputUW4_00042 | PputUW4_03493 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). | 0.742 |
| AFY17251.1 | AFY21311.1 | PputUW4_00042 | PputUW4_04119 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | [S] COG3308 Predicted membrane protein. | 0.742 |
| AFY17251.1 | AFY21968.1 | PputUW4_00042 | PputUW4_04778 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Hypothetical protein; [S] COG2921 Uncharacterized conserved protein; Belongs to the UPF0250 family. | 0.769 |
| AFY17251.1 | mucA | PputUW4_00042 | PputUW4_01279 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity. | 0.767 |
| AFY17251.1 | prlC | PputUW4_00042 | PputUW4_00041 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Oligopeptidase A; [E] COG0339 Zn-dependent oligopeptidases. | 0.807 |
| AFY17251.1 | rmf | PputUW4_00042 | PputUW4_03609 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. | 0.709 |
| AFY17251.1 | sdhD | PputUW4_00042 | PputUW4_03804 | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). | 0.693 |
| AFY18281.1 | AFY17251.1 | PputUW4_01074 | PputUW4_00042 | Hypothetical protein. | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | 0.679 |
| AFY18281.1 | AFY20063.1 | PputUW4_01074 | PputUW4_02868 | Hypothetical protein. | [S] COG3139 Uncharacterized protein conserved in bacteria. | 0.556 |
| AFY18281.1 | AFY20065.1 | PputUW4_01074 | PputUW4_02870 | Hypothetical protein. | Metallophosphoesterase; [T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. | 0.699 |
| AFY18281.1 | AFY20686.1 | PputUW4_01074 | PputUW4_03493 | Hypothetical protein. | [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). | 0.670 |
| AFY18281.1 | AFY21311.1 | PputUW4_01074 | PputUW4_04119 | Hypothetical protein. | [S] COG3308 Predicted membrane protein. | 0.668 |
| AFY18281.1 | AFY21968.1 | PputUW4_01074 | PputUW4_04778 | Hypothetical protein. | Hypothetical protein; [S] COG2921 Uncharacterized conserved protein; Belongs to the UPF0250 family. | 0.705 |
| AFY18281.1 | mucA | PputUW4_01074 | PputUW4_01279 | Hypothetical protein. | Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity. | 0.713 |
| AFY20063.1 | AFY17251.1 | PputUW4_02868 | PputUW4_00042 | [S] COG3139 Uncharacterized protein conserved in bacteria. | Hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain. | 0.747 |
| AFY20063.1 | AFY18281.1 | PputUW4_02868 | PputUW4_01074 | [S] COG3139 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.556 |
| AFY20063.1 | AFY20065.1 | PputUW4_02868 | PputUW4_02870 | [S] COG3139 Uncharacterized protein conserved in bacteria. | Metallophosphoesterase; [T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. | 0.839 |
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