STRINGSTRING
AFY17264.1 AFY17264.1 AFY17263.1 AFY17263.1 ctaA ctaA cyoE1 cyoE1 ctaC ctaC ctaG ctaG AFY17267.1 AFY17267.1 AFY17262.1 AFY17262.1 ctaE1 ctaE1 AFY19552.1 AFY19552.1 coxB coxB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17264.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
AFY17263.1
Hypothetical protein; [S] COG3346 Uncharacterized conserved protein.
 
  
 0.981
ctaA
[O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
 
 0.977
cyoE1
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.926
ctaC
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.922
ctaG
[O] COG3175 Cytochrome oxidase assembly factor.
 
 
 0.897
AFY17267.1
[R] COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
     0.833
AFY17262.1
Hypothetical protein.
 
     0.825
ctaE1
[C] COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
  
 0.749
AFY19552.1
Hypothetical protein.
 
    0.719
coxB
[C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 
 0.677
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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