STRINGSTRING
znuB znuB znuC znuC znuA znuA AFY18709.1 AFY18709.1 AFY18710.1 AFY18710.1 AFY18708.1 AFY18708.1 zur zur AFY17272.1 AFY17272.1 AFY18707.1 AFY18707.1 AFY22026.1 AFY22026.1 AFY19436.1 AFY19436.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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Textmining
[Homology]
Score
znuB[P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components. (262 aa)    
Predicted Functional Partners:
znuC
Zinc import ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 0.999
znuA
Zinc ABC transporter periplasmic protein; [P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.994
AFY18709.1
ABC transporter ATP-binding protein; [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component.
 
 0.984
AFY18710.1
[P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.980
AFY18708.1
ABC transporter permease; [P] COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
  
  
 
0.921
zur
Ferric uptake regulator family protein; [P] COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
 
  
 0.910
AFY17272.1
Lipoprotein.
     
 0.749
AFY18707.1
[P] COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
  
  
 0.683
AFY22026.1
Hypothetical protein.
  
  
 0.467
AFY19436.1
Glutamine ABC transporter ATP-binding component; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
  
 
 0.441
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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