STRINGSTRING
dsbA dsbA AFY17284.1 AFY17284.1 pleD pleD cc4 cc4 dsbC dsbC sspB sspB AFY18148.1 AFY18148.1 omlA omlA lolA lolA AFY17993.1 AFY17993.1 ftsQ ftsQ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
dsbAThiol:disulfide interchange protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins. (213 aa)    
Predicted Functional Partners:
AFY17284.1
Endonuclease/exonuclease/phosphatase family protein; [R] COG3568 Metal-dependent hydrolase.
       0.776
pleD
Diguanylate cyclase (GGDEF) domain protein; [T] COG2199 FOG: GGDEF domain.
       0.776
cc4
Cytochrome c, class I; [C] COG2863 Cytochrome c553.
 
     0.743
dsbC
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
  
 0.731
sspB
[R] COG2969 Stringent starvation protein B.
  
   
 0.721
AFY18148.1
[S] COG2976 Uncharacterized protein conserved in bacteria.
  
     0.719
omlA
Outer membrane lipoprotein OmlA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.688
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.675
AFY17993.1
Toluene tolerance protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
   0.671
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
     0.659
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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