STRINGSTRING
AFY17291.1 AFY17291.1 AFY21431.1 AFY21431.1 AFY21831.1 AFY21831.1 AFY18666.1 AFY18666.1 AFY19745.1 AFY19745.1 AFY20985.1 AFY20985.1 AFY21711.1 AFY21711.1 AFY20888.1 AFY20888.1 AFY19299.1 AFY19299.1 AFY17290.1 AFY17290.1 AFY19477.1 AFY19477.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17291.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
AFY21431.1
CsbD-like protein; [S] COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
  
  
 0.878
AFY21831.1
Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein.
  
  
 0.784
AFY18666.1
Hypothetical protein.
   
    0.712
AFY19745.1
Lipoprotein.
   
    0.665
AFY20985.1
Lipoprotein.
  
  
 0.648
AFY21711.1
Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein.
  
  
 0.629
AFY20888.1
Hypothetical protein.
   
    0.613
AFY19299.1
Hypothetical protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein.
  
  
 0.607
AFY17290.1
Hypothetical protein.
     
 0.605
AFY19477.1
Twin-arginine translocation pathway signal; [S] COG2930 Uncharacterized conserved protein.
   
    0.587
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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