Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17297.1 | AFY17299.1 | PputUW4_00088 | PputUW4_00090 | Hypothetical protein. | Luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. | 0.405 |
AFY17297.1 | AFY17302.1 | PputUW4_00088 | PputUW4_00093 | Hypothetical protein. | Hypothetical protein. | 0.659 |
AFY17297.1 | osmC | PputUW4_00088 | PputUW4_00089 | Hypothetical protein. | Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.466 |
AFY17299.1 | AFY17297.1 | PputUW4_00090 | PputUW4_00088 | Luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. | Hypothetical protein. | 0.405 |
AFY17299.1 | osmC | PputUW4_00090 | PputUW4_00089 | Luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. | Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.705 |
AFY17302.1 | AFY17297.1 | PputUW4_00093 | PputUW4_00088 | Hypothetical protein. | Hypothetical protein. | 0.659 |
AFY17302.1 | AFY17433.1 | PputUW4_00093 | PputUW4_00225 | Hypothetical protein. | [S] COG1652 Uncharacterized protein containing LysM domain. | 0.611 |
AFY17302.1 | AFY18447.1 | PputUW4_00093 | PputUW4_01240 | Hypothetical protein. | Hypothetical protein; [S] COG3422 Uncharacterized conserved protein. | 0.457 |
AFY17302.1 | AFY18661.1 | PputUW4_00093 | PputUW4_01455 | Hypothetical protein. | Hypothetical protein. | 0.520 |
AFY17302.1 | AFY18787.1 | PputUW4_00093 | PputUW4_01582 | Hypothetical protein. | 2,5-diketo-D-gluconate reductase B; [R] COG0656 Aldo/keto reductases, related to diketogulonate reductase. | 0.545 |
AFY17302.1 | AFY21831.1 | PputUW4_00093 | PputUW4_04639 | Hypothetical protein. | Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein. | 0.699 |
AFY17302.1 | osmC | PputUW4_00093 | PputUW4_00089 | Hypothetical protein. | Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.487 |
AFY17433.1 | AFY17302.1 | PputUW4_00225 | PputUW4_00093 | [S] COG1652 Uncharacterized protein containing LysM domain. | Hypothetical protein. | 0.611 |
AFY17433.1 | AFY18447.1 | PputUW4_00225 | PputUW4_01240 | [S] COG1652 Uncharacterized protein containing LysM domain. | Hypothetical protein; [S] COG3422 Uncharacterized conserved protein. | 0.890 |
AFY17433.1 | AFY18661.1 | PputUW4_00225 | PputUW4_01455 | [S] COG1652 Uncharacterized protein containing LysM domain. | Hypothetical protein. | 0.667 |
AFY17433.1 | AFY19655.1 | PputUW4_00225 | PputUW4_02458 | [S] COG1652 Uncharacterized protein containing LysM domain. | Hypothetical protein. | 0.411 |
AFY17433.1 | AFY21831.1 | PputUW4_00225 | PputUW4_04639 | [S] COG1652 Uncharacterized protein containing LysM domain. | Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein. | 0.744 |
AFY17433.1 | osmC | PputUW4_00225 | PputUW4_00089 | [S] COG1652 Uncharacterized protein containing LysM domain. | Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. | 0.468 |
AFY18447.1 | AFY17302.1 | PputUW4_01240 | PputUW4_00093 | Hypothetical protein; [S] COG3422 Uncharacterized conserved protein. | Hypothetical protein. | 0.457 |
AFY18447.1 | AFY17433.1 | PputUW4_01240 | PputUW4_00225 | Hypothetical protein; [S] COG3422 Uncharacterized conserved protein. | [S] COG1652 Uncharacterized protein containing LysM domain. | 0.890 |
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