STRINGSTRING
osmC osmC AFY17299.1 AFY17299.1 AFY21831.1 AFY21831.1 AFY18661.1 AFY18661.1 AFY19655.1 AFY19655.1 AFY17302.1 AFY17302.1 AFY18787.1 AFY18787.1 AFY17433.1 AFY17433.1 AFY17297.1 AFY17297.1 AFY18447.1 AFY18447.1 AFY18837.1 AFY18837.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmCPeroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation. (143 aa)    
Predicted Functional Partners:
AFY17299.1
Luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
     0.705
AFY21831.1
Transport-associated protein; [R] COG2823 Predicted periplasmic or secreted lipoprotein.
   
  
 0.631
AFY18661.1
Hypothetical protein.
   
    0.608
AFY19655.1
Hypothetical protein.
   
  
 0.522
AFY17302.1
Hypothetical protein.
   
  
 0.487
AFY18787.1
2,5-diketo-D-gluconate reductase B; [R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
  
 0.473
AFY17433.1
[S] COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.468
AFY17297.1
Hypothetical protein.
       0.466
AFY18447.1
Hypothetical protein; [S] COG3422 Uncharacterized conserved protein.
   
    0.459
AFY18837.1
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
  
 0.439
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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