STRINGSTRING
AFY17299.1 AFY17299.1 osmC osmC pvdD pvdD pvdI pvdI pvdJ pvdJ AFY17297.1 AFY17297.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17299.1Luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (333 aa)    
Predicted Functional Partners:
osmC
Peroxiredoxin; [O] COG1764 Predicted redox protein, regulator of disulfide bond formation.
 
     0.705
pvdD
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.654
pvdI
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.480
pvdJ
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.478
AFY17297.1
Hypothetical protein.
       0.405
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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