STRINGSTRING
atsR atsR atsB atsB ssuC ssuC ssuE ssuE atsC atsC ssuD ssuD ssuB ssuB ssuA ssuA tauC2 tauC2 AFY19519.1 AFY19519.1 AFY21933.1 AFY21933.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsRPeriplasmic aliphatic sulfonates-binding protein; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (337 aa)    
Predicted Functional Partners:
atsB
Aliphatic sulfonates ABC transporter permease; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.990
ssuC
Aliphatic sulfonates transport permease protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.987
ssuE
NAD(P)H-dependent FMN reductase; [R] COG0431 Predicted flavoprotein.
 
 
 0.986
atsC
Sulfate ester transporter ATP-binding component; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.985
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.983
ssuB
Aliphatic sulfonates transport ATP-binding subunit; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.981
ssuA
[P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 
 
0.931
tauC2
Taurine ABC transporter permease; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.875
AFY19519.1
[P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.870
AFY21933.1
Binding-protein dependent transport system inner membrane protein; [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.837
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (26%) [HD]