STRINGSTRING
AFY17379.1 AFY17379.1 AFY17380.1 AFY17380.1 AFY17381.1 AFY17381.1 sftP sftP AFY21459.1 AFY21459.1 btuB btuB AFY21288.1 AFY21288.1 AFY18046.1 AFY18046.1 tolR tolR AFY17736.1 AFY17736.1 AFY21244.1 AFY21244.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17379.1TonB-dependent membrane protein; [M] COG0810 Periplasmic protein TonB, links inner and outer membranes. (269 aa)    
Predicted Functional Partners:
AFY17380.1
MotA/TolQ/ExbB proton channel family protein; [U] COG0811 Biopolymer transport proteins.
 
 
 0.954
AFY17381.1
[U] COG0848 Biopolymer transport protein.
 
 
 0.930
sftP
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.896
AFY21459.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.780
btuB
B12 family TonB-dependent receptor; [H] COG4206 Outer membrane cobalamin receptor protein.
 
 
 
 0.737
AFY21288.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.710
AFY18046.1
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.697
tolR
Biopolymer transport protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.692
AFY17736.1
TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.682
AFY21244.1
[U] COG0848 Biopolymer transport protein.
 
 
 0.675
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (14%) [HD]