STRINGSTRING
oprD1 oprD1 AFY19352.1 AFY19352.1 phaG1 phaG1 tolA tolA AFY17954.1 AFY17954.1 AFY18604.1 AFY18604.1 AFY20712.1 AFY20712.1 sulA sulA AFY22369.1 AFY22369.1 AFY19831.1 AFY19831.1 AFY21577.1 AFY21577.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprD1Outer membrane porin D. (428 aa)    
Predicted Functional Partners:
AFY19352.1
MutT/NUDIX family hydrolase; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.600
phaG1
(R)-3-hydroxydecanoyl-ACP:CoA transacylase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.572
tolA
TolA colicin import membrane protein.
  
     0.545
AFY17954.1
Hypothetical protein; [S] COG3471 Predicted periplasmic/secreted protein.
  
     0.536
AFY18604.1
CHAD domain protein.
  
     0.519
AFY20712.1
Hypothetical protein.
  
     0.505
sulA
SOS cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.501
AFY22369.1
SdiA-regulated domain protein; [S] COG3204 Uncharacterized protein conserved in bacteria.
  
   
 0.490
AFY19831.1
Hypothetical protein.
  
     0.478
AFY21577.1
[R] COG3907 PAP2 (acid phosphatase) superfamily protein.
  
   
 0.472
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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