STRINGSTRING
phoD1 phoD1 folX folX phoD2 phoD2 folE1 folE1 folE2 folE2 folB folB AFY18811.1 AFY18811.1 folE2-2 folE2-2 AFY17778.1 AFY17778.1 AFY19401.1 AFY19401.1 AFY18736.1 AFY18736.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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Textmining
[Homology]
Score
phoD1[P] COG3540 Phosphodiesterase/alkaline phosphatase D. (468 aa)    
Predicted Functional Partners:
folX
D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase; [H] COG1539 Dihydroneopterin aldolase.
  
  
 0.924
phoD2
[P] COG3540 Phosphodiesterase/alkaline phosphatase D.
  
  
  0.919
folE1
[H] COG0302 GTP cyclohydrolase I.
    
 0.912
folE2
[H] COG0302 GTP cyclohydrolase I.
    
 0.912
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.909
AFY18811.1
[H] COG0720 6-pyruvoyl-tetrahydropterin synthase.
     
  0.900
folE2-2
GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
     
  0.900
AFY17778.1
PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain.
  
    0.712
AFY19401.1
Hypothetical protein.
  
     0.709
AFY18736.1
Hypothetical protein; [M] COG0438 Glycosyltransferase.
  
     0.708
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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