STRINGSTRING
AFY17609.1 AFY17609.1 AFY17611.1 AFY17611.1 rfaP rfaP AFY17610.1 AFY17610.1 rfaG rfaG rfaC rfaC rfaF rfaF AFY17613.1 AFY17613.1 AFY17616.1 AFY17616.1 AFY21573.1 AFY21573.1 AFY22369.1 AFY22369.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY17609.1Lipopolysaccharide core biosynthesis protein; [RTKL] COG0515 Serine/threonine protein kinase. (244 aa)    
Predicted Functional Partners:
AFY17611.1
[RTKL] COG0515 Serine/threonine protein kinase.
 
     0.954
rfaP
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
     0.953
AFY17610.1
[RTKL] COG0515 Serine/threonine protein kinase.
 
     0.953
rfaG
Lipopolysaccharide core biosynthesis protein; [M] COG0438 Glycosyltransferase.
 
     0.949
rfaC
Lipopolysaccharide heptosyltransferase I; [M] COG0859 ADP-heptose:LPS heptosyltransferase.
 
     0.860
rfaF
Lipopolysaccharide heptosyltransferase II; [M] COG0859 ADP-heptose:LPS heptosyltransferase.
 
     0.842
AFY17613.1
[O] COG2192 Predicted carbamoyl transferase, NodU family.
 
   
 0.816
AFY17616.1
LmbE-like protein.
 
     0.808
AFY21573.1
Lipopolysaccharide kinase.
 
     0.768
AFY22369.1
SdiA-regulated domain protein; [S] COG3204 Uncharacterized protein conserved in bacteria.
  
     0.765
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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