STRINGSTRING
AFY17619.1 AFY17619.1 nuoCD nuoCD msbA msbA rfaP rfaP rfaG rfaG ppkB ppkB AFY21573.1 AFY21573.1 AFY17610.1 AFY17610.1 AFY17611.1 AFY17611.1 AFY18535.1 AFY18535.1 htpG htpG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY17619.1O-Antigen Polymerase family protein; [M] COG3307 Lipid A core - O-antigen ligase and related enzymes. (620 aa)    
Predicted Functional Partners:
nuoCD
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.874
msbA
Lipid A export ATP-binding/permease protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 0.806
rfaP
Lipopolysaccharide kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.804
rfaG
Lipopolysaccharide core biosynthesis protein; [M] COG0438 Glycosyltransferase.
 
 
 0.800
ppkB
[RTKL] COG0515 Serine/threonine protein kinase.
 
 
 0.780
AFY21573.1
Lipopolysaccharide kinase.
 
   
 0.774
AFY17610.1
[RTKL] COG0515 Serine/threonine protein kinase.
 
   
 0.771
AFY17611.1
[RTKL] COG0515 Serine/threonine protein kinase.
  
     0.765
AFY18535.1
Sulfatase; [M] COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
 
     0.764
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
    
 0.764
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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