STRINGSTRING
AFY17622.1 AFY17622.1 AFY17624.1 AFY17624.1 AFY17623.1 AFY17623.1 AFY17625.1 AFY17625.1 waaA waaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17622.1Hypothetical protein. (322 aa)    
Predicted Functional Partners:
AFY17624.1
FAD dependent oxidoreductase family protein; [C] COG0578 Glycerol-3-phosphate dehydrogenase.
       0.720
AFY17623.1
Aldo/keto reductase family protein; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
       0.698
AFY17625.1
Quaternary ammonium compound-resistance protein; [P] COG2076 Membrane transporters of cations and cationic drugs.
       0.485
waaA
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
       0.402
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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