STRINGSTRING
AFY17736.1 AFY17736.1 AFY17735.1 AFY17735.1 AFY17738.1 AFY17738.1 AFY17379.1 AFY17379.1 tolA tolA tonB tonB AFY22297.1 AFY22297.1 AFY22433.1 AFY22433.1 AFY17733.1 AFY17733.1 AFY17737.1 AFY17737.1 AFY17734.1 AFY17734.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AFY17736.1TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (705 aa)    
Predicted Functional Partners:
AFY17735.1
Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein.
  
  
 0.707
AFY17738.1
[S] COG2847 Uncharacterized protein conserved in bacteria.
 
    0.691
AFY17379.1
TonB-dependent membrane protein; [M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.682
tolA
TolA colicin import membrane protein.
  
 
 0.682
tonB
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.682
AFY22297.1
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.671
AFY22433.1
TonB domain-containing protein.
  
 
 0.671
AFY17733.1
Iron ABC transporter periplasmic substrate-binding protein; [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
  
 0.600
AFY17737.1
Hypothetical protein.
  
    0.599
AFY17734.1
Iron complex transport system ATP-binding protein; [PH] COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
  
 0.594
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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