Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17735.1 | AFY17736.1 | PputUW4_00527 | PputUW4_00528 | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.707 |
AFY17735.1 | AFY17737.1 | PputUW4_00527 | PputUW4_00529 | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | Hypothetical protein. | 0.455 |
AFY17735.1 | AFY17738.1 | PputUW4_00527 | PputUW4_00530 | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | [S] COG2847 Uncharacterized protein conserved in bacteria. | 0.578 |
AFY17735.1 | AFY17739.1 | PputUW4_00527 | PputUW4_00531 | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | Hypothetical protein. | 0.429 |
AFY17736.1 | AFY17735.1 | PputUW4_00528 | PputUW4_00527 | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | 0.707 |
AFY17736.1 | AFY17737.1 | PputUW4_00528 | PputUW4_00529 | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.599 |
AFY17736.1 | AFY17738.1 | PputUW4_00528 | PputUW4_00530 | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | [S] COG2847 Uncharacterized protein conserved in bacteria. | 0.691 |
AFY17736.1 | AFY17739.1 | PputUW4_00528 | PputUW4_00531 | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.460 |
AFY17737.1 | AFY17735.1 | PputUW4_00529 | PputUW4_00527 | Hypothetical protein. | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | 0.455 |
AFY17737.1 | AFY17736.1 | PputUW4_00529 | PputUW4_00528 | Hypothetical protein. | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.599 |
AFY17737.1 | AFY17738.1 | PputUW4_00529 | PputUW4_00530 | Hypothetical protein. | [S] COG2847 Uncharacterized protein conserved in bacteria. | 0.767 |
AFY17737.1 | AFY17739.1 | PputUW4_00529 | PputUW4_00531 | Hypothetical protein. | Hypothetical protein. | 0.640 |
AFY17737.1 | AFY17740.1 | PputUW4_00529 | PputUW4_00532 | Hypothetical protein. | [K] COG3636 Predicted transcriptional regulator. | 0.445 |
AFY17737.1 | AFY17741.1 | PputUW4_00529 | PputUW4_00533 | Hypothetical protein. | [S] COG3657 Uncharacterized protein conserved in bacteria. | 0.431 |
AFY17737.1 | cobL | PputUW4_00529 | PputUW4_00536 | Hypothetical protein. | precorrin-6YC5, 15-methyltransferase(decarboxylating); [H] COG2241 Precorrin-6B methylase 1. | 0.412 |
AFY17738.1 | AFY17735.1 | PputUW4_00530 | PputUW4_00527 | [S] COG2847 Uncharacterized protein conserved in bacteria. | Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein. | 0.578 |
AFY17738.1 | AFY17736.1 | PputUW4_00530 | PputUW4_00528 | [S] COG2847 Uncharacterized protein conserved in bacteria. | TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.691 |
AFY17738.1 | AFY17737.1 | PputUW4_00530 | PputUW4_00529 | [S] COG2847 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.767 |
AFY17738.1 | AFY17739.1 | PputUW4_00530 | PputUW4_00531 | [S] COG2847 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.681 |
AFY17738.1 | AFY17740.1 | PputUW4_00530 | PputUW4_00532 | [S] COG2847 Uncharacterized protein conserved in bacteria. | [K] COG3636 Predicted transcriptional regulator. | 0.479 |
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