STRINGSTRING
AFY17739.1 AFY17739.1 AFY17738.1 AFY17738.1 AFY17737.1 AFY17737.1 AFY17740.1 AFY17740.1 AFY17741.1 AFY17741.1 cobL cobL AFY17736.1 AFY17736.1 cobK cobK cbiD cbiD AFY17735.1 AFY17735.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17739.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
AFY17738.1
[S] COG2847 Uncharacterized protein conserved in bacteria.
       0.681
AFY17737.1
Hypothetical protein.
       0.640
AFY17740.1
[K] COG3636 Predicted transcriptional regulator.
       0.580
AFY17741.1
[S] COG3657 Uncharacterized protein conserved in bacteria.
       0.560
cobL
precorrin-6YC5, 15-methyltransferase(decarboxylating); [H] COG2241 Precorrin-6B methylase 1.
       0.471
AFY17736.1
TonB-dependent copper receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.460
cobK
[H] COG2099 Precorrin-6x reductase.
       0.430
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.430
AFY17735.1
Peptidase; [S] COG3182 Uncharacterized iron-regulated membrane protein.
     
 0.429
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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