node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17773.1 | dinF | PputUW4_00565 | PputUW4_00564 | Hypothetical protein. | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | 0.539 |
AFY17773.1 | smtA | PputUW4_00565 | PputUW4_00567 | Hypothetical protein. | S-adenosylmethionine-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. | 0.593 |
dinF | AFY17773.1 | PputUW4_00564 | PputUW4_00565 | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | Hypothetical protein. | 0.539 |
dinF | epd | PputUW4_00564 | PputUW4_05065 | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.401 |
dinF | gap1 | PputUW4_00564 | PputUW4_03509 | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.401 |
dinF | gap2 | PputUW4_00564 | PputUW4_04263 | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.401 |
dinF | rpsA | PputUW4_00564 | PputUW4_01364 | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.508 |
dinF | smtA | PputUW4_00564 | PputUW4_00567 | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | S-adenosylmethionine-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. | 0.432 |
epd | dinF | PputUW4_05065 | PputUW4_00564 | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | 0.401 |
epd | rpsA | PputUW4_05065 | PputUW4_01364 | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.523 |
gap1 | dinF | PputUW4_03509 | PputUW4_00564 | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | 0.401 |
gap1 | gap2 | PputUW4_03509 | PputUW4_04263 | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.908 |
gap1 | rpsA | PputUW4_03509 | PputUW4_01364 | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.523 |
gap2 | dinF | PputUW4_04263 | PputUW4_00564 | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | 0.401 |
gap2 | gap1 | PputUW4_04263 | PputUW4_03509 | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.908 |
gap2 | rpsA | PputUW4_04263 | PputUW4_01364 | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.523 |
rpsA | dinF | PputUW4_01364 | PputUW4_00564 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | DNA-damage-inducible protein F; [V] COG0534 Na+-driven multidrug efflux pump. | 0.508 |
rpsA | epd | PputUW4_01364 | PputUW4_05065 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | D-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.523 |
rpsA | gap1 | PputUW4_01364 | PputUW4_03509 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.523 |
rpsA | gap2 | PputUW4_01364 | PputUW4_04263 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.523 |