Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17631.1 | AFY17773.1 | PputUW4_00423 | PputUW4_00565 | Lipoprotein. | Hypothetical protein. | 0.666 |
AFY17631.1 | AFY17776.1 | PputUW4_00423 | PputUW4_00568 | Lipoprotein. | Lipoprotein. | 0.599 |
AFY17631.1 | AFY21513.1 | PputUW4_00423 | PputUW4_04321 | Lipoprotein. | Hypothetical protein; [R] COG3233 Predicted deacetylase. | 0.459 |
AFY17631.1 | AFY21514.1 | PputUW4_00423 | PputUW4_04322 | Lipoprotein. | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | 0.486 |
AFY17631.1 | AFY22244.1 | PputUW4_00423 | PputUW4_05054 | Lipoprotein. | [S] COG1289 Predicted membrane protein. | 0.432 |
AFY17773.1 | AFY17631.1 | PputUW4_00565 | PputUW4_00423 | Hypothetical protein. | Lipoprotein. | 0.666 |
AFY17773.1 | AFY17776.1 | PputUW4_00565 | PputUW4_00568 | Hypothetical protein. | Lipoprotein. | 0.700 |
AFY17773.1 | AFY19618.1 | PputUW4_00565 | PputUW4_02420 | Hypothetical protein. | Transcriptional regulator. | 0.730 |
AFY17773.1 | AFY21509.1 | PputUW4_00565 | PputUW4_04317 | Hypothetical protein. | Hypothetical protein. | 0.700 |
AFY17773.1 | AFY21513.1 | PputUW4_00565 | PputUW4_04321 | Hypothetical protein. | Hypothetical protein; [R] COG3233 Predicted deacetylase. | 0.708 |
AFY17773.1 | AFY21514.1 | PputUW4_00565 | PputUW4_04322 | Hypothetical protein. | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | 0.733 |
AFY17773.1 | AFY21517.1 | PputUW4_00565 | PputUW4_04325 | Hypothetical protein. | DNA binding protein MvaT, H-NS family. | 0.729 |
AFY17773.1 | AFY22244.1 | PputUW4_00565 | PputUW4_05054 | Hypothetical protein. | [S] COG1289 Predicted membrane protein. | 0.625 |
AFY17773.1 | scrY | PputUW4_00565 | PputUW4_03366 | Hypothetical protein. | [G] COG4580 Maltoporin (phage lambda and maltose receptor). | 0.607 |
AFY17773.1 | smtA | PputUW4_00565 | PputUW4_00567 | Hypothetical protein. | S-adenosylmethionine-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family. | 0.593 |
AFY17776.1 | AFY17631.1 | PputUW4_00568 | PputUW4_00423 | Lipoprotein. | Lipoprotein. | 0.599 |
AFY17776.1 | AFY17773.1 | PputUW4_00568 | PputUW4_00565 | Lipoprotein. | Hypothetical protein. | 0.700 |
AFY17776.1 | AFY21509.1 | PputUW4_00568 | PputUW4_04317 | Lipoprotein. | Hypothetical protein. | 0.470 |
AFY17776.1 | AFY21513.1 | PputUW4_00568 | PputUW4_04321 | Lipoprotein. | Hypothetical protein; [R] COG3233 Predicted deacetylase. | 0.468 |
AFY17776.1 | AFY21514.1 | PputUW4_00568 | PputUW4_04322 | Lipoprotein. | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | 0.479 |
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