STRINGSTRING
AFY17773.1 AFY17773.1 AFY21514.1 AFY21514.1 AFY19618.1 AFY19618.1 AFY21517.1 AFY21517.1 AFY21513.1 AFY21513.1 AFY17776.1 AFY17776.1 AFY21509.1 AFY21509.1 AFY17631.1 AFY17631.1 AFY22244.1 AFY22244.1 scrY scrY smtA smtA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17773.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
AFY21514.1
Hypothetical protein; [S] COG0392 Predicted integral membrane protein.
  
     0.733
AFY19618.1
Transcriptional regulator.
  
     0.730
AFY21517.1
DNA binding protein MvaT, H-NS family.
  
     0.729
AFY21513.1
Hypothetical protein; [R] COG3233 Predicted deacetylase.
  
     0.708
AFY17776.1
Lipoprotein.
 
     0.700
AFY21509.1
Hypothetical protein.
  
     0.700
AFY17631.1
Lipoprotein.
  
     0.666
AFY22244.1
[S] COG1289 Predicted membrane protein.
  
     0.625
scrY
[G] COG4580 Maltoporin (phage lambda and maltose receptor).
  
     0.607
smtA
S-adenosylmethionine-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.
 
     0.593
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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