Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY20468.1 | AFY20589.1 | PputUW4_03273 | PputUW4_03396 | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | 0.902 |
| AFY20468.1 | add | PputUW4_03273 | PputUW4_00587 | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.900 |
| AFY20468.1 | amn | PputUW4_03273 | PputUW4_04755 | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.914 |
| AFY20468.1 | apt | PputUW4_03273 | PputUW4_03573 | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.905 |
| AFY20468.1 | ppnP | PputUW4_03273 | PputUW4_01471 | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.900 |
| AFY20468.1 | surE1 | PputUW4_03273 | PputUW4_01116 | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.902 |
| AFY20589.1 | AFY20468.1 | PputUW4_03396 | PputUW4_03273 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | 0.902 |
| AFY20589.1 | add | PputUW4_03396 | PputUW4_00587 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.932 |
| AFY20589.1 | amn | PputUW4_03396 | PputUW4_04755 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.930 |
| AFY20589.1 | apt | PputUW4_03396 | PputUW4_03573 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.918 |
| AFY20589.1 | hprT | PputUW4_03396 | PputUW4_04562 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | [F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase. | 0.919 |
| AFY20589.1 | ppnP | PputUW4_03396 | PputUW4_01471 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.900 |
| AFY20589.1 | surE1 | PputUW4_03396 | PputUW4_01116 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.902 |
| AFY20589.1 | xdhA | PputUW4_03396 | PputUW4_03599 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A. | 0.915 |
| AFY20589.1 | xdhB | PputUW4_03396 | PputUW4_03600 | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | [F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B. | 0.921 |
| add | AFY20468.1 | PputUW4_00587 | PputUW4_03273 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Lysine decarboxylase; [R] COG1611 Predicted Rossmann fold nucleotide-binding protein. | 0.900 |
| add | AFY20589.1 | PputUW4_00587 | PputUW4_03396 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | [F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family. | 0.932 |
| add | amn | PputUW4_00587 | PputUW4_04755 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations. | 0.932 |
| add | apt | PputUW4_00587 | PputUW4_03573 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.945 |
| add | guaA1 | PputUW4_00587 | PputUW4_00980 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.616 |
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