Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17798.1 | AFY17799.1 | PputUW4_00590 | PputUW4_00591 | Hydroxydechloroatrazine ethylaminohydrolase; [FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases. | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.463 |
AFY17799.1 | AFY17798.1 | PputUW4_00591 | PputUW4_00590 | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Hydroxydechloroatrazine ethylaminohydrolase; [FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases. | 0.463 |
AFY17799.1 | AFY17800.1 | PputUW4_00591 | PputUW4_00592 | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Hypothetical protein. | 0.725 |
AFY17799.1 | AFY17801.1 | PputUW4_00591 | PputUW4_00593 | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Hypothetical protein. | 0.589 |
AFY17799.1 | ndk | PputUW4_00591 | PputUW4_00935 | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.621 |
AFY17799.1 | pvdD | PputUW4_00591 | PputUW4_01549 | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.579 |
AFY17800.1 | AFY17799.1 | PputUW4_00592 | PputUW4_00591 | Hypothetical protein. | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.725 |
AFY17800.1 | AFY17801.1 | PputUW4_00592 | PputUW4_00593 | Hypothetical protein. | Hypothetical protein. | 0.554 |
AFY17801.1 | AFY17799.1 | PputUW4_00593 | PputUW4_00591 | Hypothetical protein. | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.589 |
AFY17801.1 | AFY17800.1 | PputUW4_00593 | PputUW4_00592 | Hypothetical protein. | Hypothetical protein. | 0.554 |
ndk | AFY17799.1 | PputUW4_00935 | PputUW4_00591 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.621 |
ndk | pvdD | PputUW4_00935 | PputUW4_01549 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.617 |
pvdD | AFY17799.1 | PputUW4_01549 | PputUW4_00591 | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.579 |
pvdD | ndk | PputUW4_01549 | PputUW4_00935 | [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.617 |