STRINGSTRING
AFY17804.1 AFY17804.1 AFY17803.1 AFY17803.1 AFY17802.1 AFY17802.1 AFY17797.1 AFY17797.1 AFY18516.1 AFY18516.1 rbsC rbsC ppkB ppkB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17804.1ABC transporter ATP-binding protein; [R] COG3845 ABC-type uncharacterized transport systems, ATPase components. (521 aa)    
Predicted Functional Partners:
AFY17803.1
Inner-membrane translocator; [R] COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
AFY17802.1
Inner-membrane translocator; [R] COG1079 Uncharacterized ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AFY17797.1
Basic membrane lipoprotein; [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.988
AFY18516.1
L-arabinose transporter permease protein; [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
     0.521
rbsC
[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
     0.505
ppkB
[RTKL] COG0515 Serine/threonine protein kinase.
  
    0.421
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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