STRINGSTRING
AFY17820.1 AFY17820.1 AFY18952.1 AFY18952.1 AFY18936.1 AFY18936.1 AFY19116.1 AFY19116.1 AFY17821.1 AFY17821.1 AFY19393.1 AFY19393.1 AFY18637.1 AFY18637.1 AFY17235.1 AFY17235.1 AFY20615.1 AFY20615.1 gcvA2 gcvA2 AFY21548.1 AFY21548.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY17820.1[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
AFY18952.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.763
AFY18936.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.760
AFY19116.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.730
AFY17821.1
Hypothetical protein; [R] COG0730 Predicted permeases.
 
     0.698
AFY19393.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.694
AFY18637.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.689
AFY17235.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.684
AFY20615.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.668
gcvA2
Glycine cleavage system transcriptional activator; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.668
AFY21548.1
[K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.663
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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