Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17342.1 | AFY17821.1 | PputUW4_00134 | PputUW4_00613 | Hypothetical protein. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.409 |
AFY17819.1 | AFY17820.1 | PputUW4_00611 | PputUW4_00612 | NAD(P)H dehydrogenase (quinone); [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.639 |
AFY17819.1 | AFY17821.1 | PputUW4_00611 | PputUW4_00613 | NAD(P)H dehydrogenase (quinone); [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.409 |
AFY17820.1 | AFY17819.1 | PputUW4_00612 | PputUW4_00611 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | NAD(P)H dehydrogenase (quinone); [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). | 0.639 |
AFY17820.1 | AFY17821.1 | PputUW4_00612 | PputUW4_00613 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.698 |
AFY17821.1 | AFY17342.1 | PputUW4_00613 | PputUW4_00134 | Hypothetical protein; [R] COG0730 Predicted permeases. | Hypothetical protein. | 0.409 |
AFY17821.1 | AFY17819.1 | PputUW4_00613 | PputUW4_00611 | Hypothetical protein; [R] COG0730 Predicted permeases. | NAD(P)H dehydrogenase (quinone); [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). | 0.409 |
AFY17821.1 | AFY17820.1 | PputUW4_00613 | PputUW4_00612 | Hypothetical protein; [R] COG0730 Predicted permeases. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.698 |
AFY17821.1 | AFY18246.1 | PputUW4_00613 | PputUW4_01039 | Hypothetical protein; [R] COG0730 Predicted permeases. | [S] COG2979 Uncharacterized protein conserved in bacteria. | 0.401 |
AFY17821.1 | AFY20531.1 | PputUW4_00613 | PputUW4_03336 | Hypothetical protein; [R] COG0730 Predicted permeases. | Sulfopyruvate decarboxylase alpha subunit; [R] COG4032 Predicted thiamine-pyrophosphate-binding protein. | 0.469 |
AFY17821.1 | AFY20532.1 | PputUW4_00613 | PputUW4_03337 | Hypothetical protein; [R] COG0730 Predicted permeases. | Sulfopyruvate decarboxylase; [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]. | 0.464 |
AFY18246.1 | AFY17821.1 | PputUW4_01039 | PputUW4_00613 | [S] COG2979 Uncharacterized protein conserved in bacteria. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.401 |
AFY20531.1 | AFY17821.1 | PputUW4_03336 | PputUW4_00613 | Sulfopyruvate decarboxylase alpha subunit; [R] COG4032 Predicted thiamine-pyrophosphate-binding protein. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.469 |
AFY20531.1 | AFY20532.1 | PputUW4_03336 | PputUW4_03337 | Sulfopyruvate decarboxylase alpha subunit; [R] COG4032 Predicted thiamine-pyrophosphate-binding protein. | Sulfopyruvate decarboxylase; [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]. | 0.955 |
AFY20532.1 | AFY17821.1 | PputUW4_03337 | PputUW4_00613 | Sulfopyruvate decarboxylase; [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]. | Hypothetical protein; [R] COG0730 Predicted permeases. | 0.464 |
AFY20532.1 | AFY20531.1 | PputUW4_03337 | PputUW4_03336 | Sulfopyruvate decarboxylase; [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]. | Sulfopyruvate decarboxylase alpha subunit; [R] COG4032 Predicted thiamine-pyrophosphate-binding protein. | 0.955 |