Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17961.1 | AFY17963.1 | PputUW4_00754 | PputUW4_00756 | D-galactonate transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | Auxin efflux carrier; [R] COG0679 Predicted permeases. | 0.469 |
AFY17961.1 | garD | PputUW4_00754 | PputUW4_00755 | D-galactonate transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | [G] COG2721 Altronate dehydratase. | 0.922 |
AFY17963.1 | AFY17961.1 | PputUW4_00756 | PputUW4_00754 | Auxin efflux carrier; [R] COG0679 Predicted permeases. | D-galactonate transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.469 |
AFY17963.1 | AFY19618.1 | PputUW4_00756 | PputUW4_02420 | Auxin efflux carrier; [R] COG0679 Predicted permeases. | Transcriptional regulator. | 0.461 |
AFY17963.1 | garD | PputUW4_00756 | PputUW4_00755 | Auxin efflux carrier; [R] COG0679 Predicted permeases. | [G] COG2721 Altronate dehydratase. | 0.481 |
AFY17963.1 | maeB | PputUW4_00756 | PputUW4_00342 | Auxin efflux carrier; [R] COG0679 Predicted permeases. | [C] COG0281 Malic enzyme. | 0.827 |
AFY19618.1 | AFY17963.1 | PputUW4_02420 | PputUW4_00756 | Transcriptional regulator. | Auxin efflux carrier; [R] COG0679 Predicted permeases. | 0.461 |
garD | AFY17961.1 | PputUW4_00755 | PputUW4_00754 | [G] COG2721 Altronate dehydratase. | D-galactonate transporter; [GEPR] COG0477 Permeases of the major facilitator superfamily. | 0.922 |
garD | AFY17963.1 | PputUW4_00755 | PputUW4_00756 | [G] COG2721 Altronate dehydratase. | Auxin efflux carrier; [R] COG0679 Predicted permeases. | 0.481 |
maeB | AFY17963.1 | PputUW4_00342 | PputUW4_00756 | [C] COG0281 Malic enzyme. | Auxin efflux carrier; [R] COG0679 Predicted permeases. | 0.827 |