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AFY18043.1 AFY18043.1 AFY18044.1 AFY18044.1 fecR2 fecR2 fecR4 fecR4 fecR1 fecR1 fecR5 fecR5 AFY20092.1 AFY20092.1 fecR3 fecR3 AFY18046.1 AFY18046.1 mucA mucA AFY18042.1 AFY18042.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18043.1[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)    
Predicted Functional Partners:
AFY18044.1
FecR family protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.956
fecR2
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.806
fecR4
Sigma factor regulatory protein FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.804
fecR1
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.800
fecR5
FecR protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.783
AFY20092.1
Sigma factor regulatory protein FecR/PupR family; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.781
fecR3
FecR protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.761
AFY18046.1
TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.694
mucA
Sigma factor algU negative regulatory protein MucA; [T] COG3073 Negative regulator of sigma E activity.
  
 
 0.687
AFY18042.1
Ribosomal subunit interface protein.
     
 0.519
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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