STRINGSTRING
AFY18046.1 AFY18046.1 AFY17379.1 AFY17379.1 AFY18044.1 AFY18044.1 AFY18043.1 AFY18043.1 tonB tonB fecR4 fecR4 fecR2 fecR2 sftP sftP fecR1 fecR1 fecR5 fecR5 pvdJ pvdJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18046.1TonB-dependent siderophore receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. (809 aa)    
Predicted Functional Partners:
AFY17379.1
TonB-dependent membrane protein; [M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.697
AFY18044.1
FecR family protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.697
AFY18043.1
[K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.694
tonB
[M] COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.614
fecR4
Sigma factor regulatory protein FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.571
fecR2
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.545
sftP
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.542
fecR1
anti-FecI sigma factor FecR; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.539
fecR5
FecR protein; [PT] COG3712 Fe2+-dicitrate sensor, membrane component.
 
 
 0.528
pvdJ
[Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.519
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.