Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY21460.1 | cyoE1 | PputUW4_04268 | PputUW4_00057 | [P] COG3230 Heme oxygenase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.900 |
| AFY21460.1 | cyoE2 | PputUW4_04268 | PputUW4_00855 | [P] COG3230 Heme oxygenase. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.900 |
| AFY21460.1 | hemH | PputUW4_04268 | PputUW4_04565 | [P] COG3230 Heme oxygenase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.901 |
| ctaA | ctaD1 | PputUW4_00056 | PputUW4_00050 | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.832 |
| ctaA | ctaG | PputUW4_00056 | PputUW4_00051 | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | [O] COG3175 Cytochrome oxidase assembly factor. | 0.992 |
| ctaA | cyoB | PputUW4_00056 | PputUW4_00852 | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.611 |
| ctaA | cyoE1 | PputUW4_00056 | PputUW4_00057 | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.998 |
| ctaA | cyoE2 | PputUW4_00056 | PputUW4_00855 | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.980 |
| ctaD1 | ctaA | PputUW4_00050 | PputUW4_00056 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.832 |
| ctaD1 | ctaG | PputUW4_00050 | PputUW4_00051 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | [O] COG3175 Cytochrome oxidase assembly factor. | 0.883 |
| ctaD1 | cyoA | PputUW4_00050 | PputUW4_00851 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | [C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.953 |
| ctaD1 | cyoC | PputUW4_00050 | PputUW4_00853 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | [C] COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.949 |
| ctaD1 | cyoD | PputUW4_00050 | PputUW4_00854 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | [C] COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4. | 0.904 |
| ctaD1 | cyoE1 | PputUW4_00050 | PputUW4_00057 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.922 |
| ctaD1 | cyoE2 | PputUW4_00050 | PputUW4_00855 | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.893 |
| ctaG | ctaA | PputUW4_00051 | PputUW4_00056 | [O] COG3175 Cytochrome oxidase assembly factor. | [O] COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.992 |
| ctaG | ctaD1 | PputUW4_00051 | PputUW4_00050 | [O] COG3175 Cytochrome oxidase assembly factor. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.883 |
| ctaG | cyoA | PputUW4_00051 | PputUW4_00851 | [O] COG3175 Cytochrome oxidase assembly factor. | [C] COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.612 |
| ctaG | cyoB | PputUW4_00051 | PputUW4_00852 | [O] COG3175 Cytochrome oxidase assembly factor. | [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.491 |
| ctaG | cyoC | PputUW4_00051 | PputUW4_00853 | [O] COG3175 Cytochrome oxidase assembly factor. | [C] COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.590 |
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