STRINGSTRING
AFY18189.1 AFY18189.1 copB copB tadA tadA cinA cinA cueA cueA AFY18188.1 AFY18188.1 AFY21568.1 AFY21568.1 tatC tatC tatB tatB AFY21569.1 AFY21569.1 AFY19646.1 AFY19646.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AFY18189.1[Q] COG2132 Putative multicopper oxidases. (458 aa)    
Predicted Functional Partners:
copB
[P] COG3667 Uncharacterized protein involved in copper resistance.
 
  
 0.868
tadA
Cytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.799
cinA
Copper-containing zaurin-like protein; [P] COG4454 Uncharacterized copper-binding protein.
 
  
 0.708
cueA
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
 
 0.702
AFY18188.1
Hypothetical protein.
   
 
 0.566
AFY21568.1
Putative lipoprotein; [R] COG3489 Predicted periplasmic lipoprotein.
 
     0.560
tatC
Sec-independent protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.551
tatB
Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
   
 
 0.549
AFY21569.1
[S] COG3490 Uncharacterized protein conserved in bacteria.
 
     0.507
AFY19646.1
Hypothetical protein; [R] COG3019 Predicted metal-binding protein.
 
   
 0.474
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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