Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY17455.1 | AFY18209.1 | PputUW4_00247 | PputUW4_01002 | Hypothetical protein. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.456 |
AFY17545.1 | AFY18209.1 | PputUW4_00337 | PputUW4_01002 | Sporulation domain protein; [D] COG3087 Cell division protein. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.516 |
AFY17545.1 | amiC | PputUW4_00337 | PputUW4_00449 | Sporulation domain protein; [D] COG3087 Cell division protein. | [M] COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.788 |
AFY18208.1 | AFY18209.1 | PputUW4_01001 | PputUW4_01002 | Hypothetical protein. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.461 |
AFY18209.1 | AFY17455.1 | PputUW4_01002 | PputUW4_00247 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | Hypothetical protein. | 0.456 |
AFY18209.1 | AFY17545.1 | PputUW4_01002 | PputUW4_00337 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | Sporulation domain protein; [D] COG3087 Cell division protein. | 0.516 |
AFY18209.1 | AFY18208.1 | PputUW4_01002 | PputUW4_01001 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | Hypothetical protein. | 0.461 |
AFY18209.1 | AFY18630.1 | PputUW4_01002 | PputUW4_01424 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | Hypothetical protein. | 0.414 |
AFY18209.1 | AFY22120.1 | PputUW4_01002 | PputUW4_04930 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | [T] COG4585 Signal transduction histidine kinase. | 0.409 |
AFY18209.1 | amiC | PputUW4_01002 | PputUW4_00449 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | [M] COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.495 |
AFY18209.1 | chrA | PputUW4_01002 | PputUW4_03067 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | [P] COG2059 Chromate transport protein ChrA. | 0.426 |
AFY18209.1 | rlpA2 | PputUW4_01002 | PputUW4_04780 | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.617 |
AFY18630.1 | AFY18209.1 | PputUW4_01424 | PputUW4_01002 | Hypothetical protein. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.414 |
AFY22120.1 | AFY18209.1 | PputUW4_04930 | PputUW4_01002 | [T] COG4585 Signal transduction histidine kinase. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.409 |
amiC | AFY17545.1 | PputUW4_00449 | PputUW4_00337 | [M] COG0860 N-acetylmuramoyl-L-alanine amidase. | Sporulation domain protein; [D] COG3087 Cell division protein. | 0.788 |
amiC | AFY18209.1 | PputUW4_00449 | PputUW4_01002 | [M] COG0860 N-acetylmuramoyl-L-alanine amidase. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.495 |
amiC | rlpA2 | PputUW4_00449 | PputUW4_04780 | [M] COG0860 N-acetylmuramoyl-L-alanine amidase. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.809 |
chrA | AFY18209.1 | PputUW4_03067 | PputUW4_01002 | [P] COG2059 Chromate transport protein ChrA. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.426 |
rlpA2 | AFY18209.1 | PputUW4_04780 | PputUW4_01002 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). | 0.617 |
rlpA2 | amiC | PputUW4_04780 | PputUW4_00449 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | [M] COG0860 N-acetylmuramoyl-L-alanine amidase. | 0.809 |