Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY17440.1 | AFY18225.1 | PputUW4_00232 | PputUW4_01018 | Histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.637 |
| AFY17440.1 | AFY21534.1 | PputUW4_00232 | PputUW4_04342 | Histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | Sensor histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.919 |
| AFY17440.1 | AFY22249.1 | PputUW4_00232 | PputUW4_05059 | Histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | Response regulator/sensory box/GGDEF domain/EAL domain-containing protein; [T] COG2200 FOG: EAL domain; COG2199 FOG: GGDEF domain. | 0.435 |
| AFY17778.1 | AFY18225.1 | PputUW4_00570 | PputUW4_01018 | PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain. | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.552 |
| AFY17778.1 | AFY19569.1 | PputUW4_00570 | PputUW4_02371 | PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain. | PAS/PAC sensor hybrid histidine kinase; [T] COG0642 Signal transduction histidine kinase. | 0.800 |
| AFY17778.1 | AFY22249.1 | PputUW4_00570 | PputUW4_05059 | PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain. | Response regulator/sensory box/GGDEF domain/EAL domain-containing protein; [T] COG2200 FOG: EAL domain; COG2199 FOG: GGDEF domain. | 0.797 |
| AFY17778.1 | pilL | PputUW4_00570 | PputUW4_05101 | PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain. | Type IV pili sensor histidine kinase/response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.729 |
| AFY17778.1 | wspE | PputUW4_00570 | PputUW4_01044 | PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain. | Sensor histidine kinase/response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.683 |
| AFY18225.1 | AFY17440.1 | PputUW4_01018 | PputUW4_00232 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.637 |
| AFY18225.1 | AFY17778.1 | PputUW4_01018 | PputUW4_00570 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | PAS/PAC sensor signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain. | 0.552 |
| AFY18225.1 | AFY18226.1 | PputUW4_01018 | PputUW4_01019 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | [T] COG0642 Signal transduction histidine kinase. | 0.992 |
| AFY18225.1 | AFY19569.1 | PputUW4_01018 | PputUW4_02371 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | PAS/PAC sensor hybrid histidine kinase; [T] COG0642 Signal transduction histidine kinase. | 0.555 |
| AFY18225.1 | AFY21534.1 | PputUW4_01018 | PputUW4_04342 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Sensor histidine kinase; [T] COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system. | 0.704 |
| AFY18225.1 | AFY22249.1 | PputUW4_01018 | PputUW4_05059 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Response regulator/sensory box/GGDEF domain/EAL domain-containing protein; [T] COG2200 FOG: EAL domain; COG2199 FOG: GGDEF domain. | 0.672 |
| AFY18225.1 | ntrB | PputUW4_01018 | PputUW4_00283 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | [T] COG3852 Signal transduction histidine kinase, nitrogen specific. | 0.573 |
| AFY18225.1 | pilL | PputUW4_01018 | PputUW4_05101 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Type IV pili sensor histidine kinase/response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.552 |
| AFY18225.1 | rpoN | PputUW4_01018 | PputUW4_00777 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.778 |
| AFY18225.1 | wspE | PputUW4_01018 | PputUW4_01044 | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Sensor histidine kinase/response regulator; [NT] COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.552 |
| AFY18226.1 | AFY18225.1 | PputUW4_01019 | PputUW4_01018 | [T] COG0642 Signal transduction histidine kinase. | Two component, sigma-54 specific, Fis family transcriptional regulator; [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.992 |
| AFY18226.1 | AFY22249.1 | PputUW4_01019 | PputUW4_05059 | [T] COG0642 Signal transduction histidine kinase. | Response regulator/sensory box/GGDEF domain/EAL domain-containing protein; [T] COG2200 FOG: EAL domain; COG2199 FOG: GGDEF domain. | 0.435 |
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