STRINGSTRING
AFY18229.1 AFY18229.1 AFY18227.1 AFY18227.1 AFY18230.1 AFY18230.1 AFY18228.1 AFY18228.1 AFY17400.1 AFY17400.1 AFY20194.1 AFY20194.1 AFY17398.1 AFY17398.1 glnQ glnQ AFY22444.1 AFY22444.1 AFY20196.1 AFY20196.1 AFY19861.1 AFY19861.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY18229.1[E] COG0765 ABC-type amino acid transport system, permease component. (248 aa)    
Predicted Functional Partners:
AFY18227.1
ABC transporter-like protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.997
AFY18230.1
Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.992
AFY18228.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
 
 
0.988
AFY17400.1
Cystine transporter subunit; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.941
AFY20194.1
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.863
AFY17398.1
Cystine transport system ATP-binding protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.858
glnQ
[E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.844
AFY22444.1
ABC transporter ATP-binding protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.825
AFY20196.1
Periplasmic amino acid binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.816
AFY19861.1
[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.801
Your Current Organism:
Pseudomonas sp. UW4
NCBI taxonomy Id: 1207075
Other names: P. sp. UW4
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