Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY18230.1 | opgD | PputUW4_01023 | PputUW4_01024 | Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | 0.413 |
AFY18232.1 | opgD | PputUW4_01025 | PputUW4_01024 | Hypothetical protein. | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | 0.423 |
AFY22038.1 | AFY22266.1 | PputUW4_04848 | PputUW4_05076 | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | [P] COG2116 Formate/nitrite family of transporters. | 0.427 |
AFY22038.1 | opgD | PputUW4_04848 | PputUW4_01024 | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | 0.603 |
AFY22038.1 | opgH | PputUW4_04848 | PputUW4_00315 | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | Glucans biosynthesis glucosyltransferase H; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.546 |
AFY22266.1 | AFY22038.1 | PputUW4_05076 | PputUW4_04848 | [P] COG2116 Formate/nitrite family of transporters. | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | 0.427 |
AFY22266.1 | opgD | PputUW4_05076 | PputUW4_01024 | [P] COG2116 Formate/nitrite family of transporters. | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | 0.410 |
opgD | AFY18230.1 | PputUW4_01024 | PputUW4_01023 | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | Extracellular solute-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.413 |
opgD | AFY18232.1 | PputUW4_01024 | PputUW4_01025 | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | Hypothetical protein. | 0.423 |
opgD | AFY22038.1 | PputUW4_01024 | PputUW4_04848 | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | 0.603 |
opgD | AFY22266.1 | PputUW4_01024 | PputUW4_05076 | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | [P] COG2116 Formate/nitrite family of transporters. | 0.410 |
opgD | opgH | PputUW4_01024 | PputUW4_00315 | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | Glucans biosynthesis glucosyltransferase H; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | 0.843 |
opgH | AFY22038.1 | PputUW4_00315 | PputUW4_04848 | Glucans biosynthesis glucosyltransferase H; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Hypothetical protein; [S] COG0392 Predicted integral membrane protein. | 0.546 |
opgH | opgD | PputUW4_00315 | PputUW4_01024 | Glucans biosynthesis glucosyltransferase H; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). | Glucans biosynthesis protein D; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). | 0.843 |