Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY18281.1 | AFY18284.1 | PputUW4_01074 | PputUW4_01077 | Hypothetical protein. | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.454 |
| AFY18281.1 | dapE | PputUW4_01074 | PputUW4_01076 | Hypothetical protein. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.617 |
| AFY18281.1 | rlmA | PputUW4_01074 | PputUW4_01075 | Hypothetical protein. | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | 0.617 |
| AFY18284.1 | AFY18281.1 | PputUW4_01077 | PputUW4_01074 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Hypothetical protein. | 0.454 |
| AFY18284.1 | AFY18285.1 | PputUW4_01077 | PputUW4_01078 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | UBA/THIF-type NAD/FAD binding protein; [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.585 |
| AFY18284.1 | dapE | PputUW4_01077 | PputUW4_01076 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.529 |
| AFY18284.1 | rlmA | PputUW4_01077 | PputUW4_01075 | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | 0.517 |
| AFY18285.1 | AFY18284.1 | PputUW4_01078 | PputUW4_01077 | UBA/THIF-type NAD/FAD binding protein; [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.585 |
| AFY18285.1 | dapE | PputUW4_01078 | PputUW4_01076 | UBA/THIF-type NAD/FAD binding protein; [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.426 |
| AFY18285.1 | rlmA | PputUW4_01078 | PputUW4_01075 | UBA/THIF-type NAD/FAD binding protein; [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | 0.402 |
| dapE | AFY18281.1 | PputUW4_01076 | PputUW4_01074 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | Hypothetical protein. | 0.617 |
| dapE | AFY18284.1 | PputUW4_01076 | PputUW4_01077 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.529 |
| dapE | AFY18285.1 | PputUW4_01076 | PputUW4_01078 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | UBA/THIF-type NAD/FAD binding protein; [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.426 |
| dapE | rlmA | PputUW4_01076 | PputUW4_01075 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | 0.890 |
| rlmA | AFY18281.1 | PputUW4_01075 | PputUW4_01074 | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | Hypothetical protein. | 0.617 |
| rlmA | AFY18284.1 | PputUW4_01075 | PputUW4_01077 | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. | 0.517 |
| rlmA | AFY18285.1 | PputUW4_01075 | PputUW4_01078 | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | UBA/THIF-type NAD/FAD binding protein; [H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.402 |
| rlmA | dapE | PputUW4_01075 | PputUW4_01076 | rRNA (guanine-N(1)-)-methyltransferase; [QR] COG0500 SAM-dependent methyltransferases. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.890 |